WormBase Tree Display for Variation: WBVar00010011
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| WBVar00010011 | Evidence | Paper_evidence | WBPaper00037807 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00010011 | |||
| Other_name | pas13599 | ||||
| haw16476 | |||||
| cewivar00076374 | |||||
| T27A1.6.1:c.312-331T>A | |||||
| HGVSg | CHROMOSOME_II:g.518888T>A | ||||
| Sequence_details | SMap | S_parent | Sequence | T27A1 | |
| Flanking_sequences | aaataccacattcatcaattcagaagatgtagtagtacggagggctgtgattgaattctgtctttgatgggtcacttgggaattaggattactgtagaatagataatgattttggtgatgggaaatgtcaagtaatatagaaaaataattagagtacaaaatattgaaaatatgatgaaaaaatgtcaattttgaagaaagttatgatggtttaaaaaaatttgaaaaaaaattggaaatttttccaaaaaaagtttcacaagaacttttgtggagcttgaaattttttgaaactgtgtg | aatctctgattatcagtttagtcaataagttgctagttcacaaattatagaacttacatttttgagtattctgccatttgaaaattgtctgatagattcctttgtttttaagatccatgggtttctagtttgtctcaaaaagttttagtttccaatgcaaacccctaattttggcagtggcaagtgacattcagctgaaaattgtggaaaataactagaaaacataataagtttcaaaaaaatgcctaaagaaaatctaattctttttacaaaattgttttttccaaattttccaaattt | |||
| Mapping_target | T27A1 | ||||
| Type_of_mutation | Substitution | T | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (15) | |||||
| Laboratory | AX | ||||
| RW | |||||
| Person | WBPerson6900 | ||||
| WBPerson1562 | |||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | |||||
| WGS_Hawaiian_Waterston | |||||
| History | Acquires_merge | WBVar00163226 | |||
| WBVar01358055 | |||||
| WBVar01291977 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00003106 | |||
| Transcript | T27A1.6.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | T27A1.6.1:c.312-331T>A | ||||
| Intron_number | 4/10 | ||||
| Reference | WBPaper00037807 | ||||
| Method | WGS_Pasadena_Quinlan |
