WormBase Tree Display for Variation: WBVar00011162

WBVar00011162 Name: Public_name: WBVar00011162
    Other_name: cbv12609
    HGVSg: chrIII:g.9229054A>T
  Sequence_details: SMap: S_parent: Sequence: cb25.fpc2234
    Flanking_sequences: CTGGTTAACAAGAGGCTTAGAAAAA CGGAAATTAGGAAAACTAAATTTGG
    Mapping_target: cb25.fpc2234
    Type_of_mutation: Substitution: A T
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis briggsae
    Strain: WBStrain00042094
    Laboratory: CP
    Person: WBPerson3706
      WBPerson227
      WBPerson225
    Status: Live
  Affects: Gene: WBGene00031464
    Transcript: CBG09974a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: CBG09974a.1:c.5754+58T>A
        Intron_number: 11/12
      CBG09974b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: CBG09974b.1:c.5754+58T>A
        Intron_number: 11/13
      CBG09974c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: CBG09974c.1:c.4782+58T>A
        Intron_number: 7/9
      CBG09974d.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: CBG09974d.1:c.5703+109T>A
        Intron_number: 11/13
      CBG09974e.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: CBG09974e.1:c.5754+58T>A
        Intron_number: 11/12
      CBG09974f.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: CBG09974f.1:c.5703+109T>A
        Intron_number: 11/12
      CBG09974g.1 VEP_consequence: 3_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: CBG09974g.1:c.*16T>A
        cDNA_position: 5980
        Exon_number: 12/13
      CBG09974g.2 VEP_consequence: 3_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: CBG09974g.2:c.*16T>A
        cDNA_position: 5980
        Exon_number: 12/12
  Method: SNP