WormBase Tree Display for Variation: WBVar00018781
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| WBVar00018781 | Name | Public_name | WBVar00018781 | ||
|---|---|---|---|---|---|
| Other_name | pas15353 | ||||
| haw140207 | |||||
| cewivar00020252 | |||||
| Y82E9BL.12.1:c.396A>G | |||||
| CE54141:p.Arg132= | |||||
| HGVSg | CHROMOSOME_III:g.1310093A>G | ||||
| Sequence_details | SMap | S_parent | Sequence | Y82E9BL | |
| Flanking_sequences | ccatcagatgaacacgaaatggcaaaaaactgaaatttgtgacaaagtattcaaggacgtggcgacagttccaatgtcaaatttacatgaagtcaaatgggccattctgccaacttgtgagagtttgtggggatacggtatgggtaagagtactgtaggggctgcagggttgttgtaggattactgtaggattactgtaggagtactgtgaggccattgtaattttttccagaaagaggagaacataatggtaacgctgggtattggtcatgacactatggcggaagaaaaactgaacag | gtaagaatttctcacgaatctaaaattgcataatttatgttttcagactctccccaacacgaaattcttcggagccgacccgataattgagccgaaccgccaactttacacagctttcggaaaatacttcccgtttgcaattggcaagaagcctggtttcacgaaattccgagttcttccgaatcaaaatcagagaacaagtttggttaatttttgaattttgggaacaaattttgaaaattcaggaaagtaccagtatcaagatgtcactacaatcccgctcacctattttttgtctga | |||
| Mapping_target | Y82E9BL | ||||
| Type_of_mutation | Substitution | A | G | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (25) | |||||
| Laboratory | AX | ||||
| Person | WBPerson6900 | ||||
| WBPerson4037 | |||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| WGS_De_Bono | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar01391083 | |||
| WBVar00560072 | |||||
| WBVar01324263 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00022328 | |||
| Transcript | Y82E9BL.12.1 | VEP_consequence | splice_region_variant,synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | Y82E9BL.12.1:c.396A>G | ||||
| HGVSp | CE54141:p.Arg132= | ||||
| cDNA_position | 396 | ||||
| CDS_position | 396 | ||||
| Protein_position | 132 | ||||
| Exon_number | 3/7 | ||||
| Codon_change | agA/agG | ||||
| Amino_acid_change | R | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00037807 | |||||
| Method | WGS_Pasadena_Quinlan |
