WormBase Tree Display for Variation: WBVar00022286

WBVar00022286 Evidence: Paper_evidence: WBPaper00037807
  Name: Public_name: WBVar00022286
    Other_name: pas16054
      cewivar00022473
      F53A3.4b.1:c.3195+1954G>A
      F53A3.4a.1:c.3195+1954G>A
      F53A3.4c.1:c.3195+1954G>A
    HGVSg: CHROMOSOME_III:g.1919258G>A
  Sequence_details: SMap: S_parent: Sequence: B0524
    Flanking_sequences: ggaattttcagaattttcaactagaaaattggcaaaaacggtttttaattatgtgatcagctatgtagcagcctgagaaatcagatttacctgattttttaaggtcgacatcggctgagatctacgagaaatctcccacaatttcgcctgaaaattcatatcgcgagctctaaaacttcatttcctccaaaatgtgctccgacttgctctaaagtcttccacaggcttcaagagcacgttttctgtgtgaatcagtgtgaaattcactcgaactgatctggaaattggtatttttcgcga aaaattctatgcgaggctcaatattctgaaatttgcattaaaaaatatgctttttcaagaaattgaaccacatagctctcgagcttcattttttaagagccctgctccttccgtctcagcttaaaatgcttctgaaaaatgattctgaagattcatagcagggatgagttttgctcttctgcgagcaacaccagcaaacacattactgaaactctttgcatcgccccttcctcctgccttatccgtatgctccgttgatgcgctgaccgaggataattccctttttttttgcgcctcact
    Mapping_target: B0524
    Type_of_mutation: Substitution: G A
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain (14)
    Laboratory: AX
    Person: WBPerson6900
    Analysis: WGS_Pasadena_Quinlan
      WGS_De_Bono
      Million_mutation_project_reanalysis
    History: Acquires_merge: WBVar01326409
    Status: Live
  Affects: Gene: WBGene00004128
    Transcript: F53A3.4c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F53A3.4c.1:c.3195+1954G>A
        Intron_number: 14/16
      F53A3.4b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F53A3.4b.1:c.3195+1954G>A
        Intron_number: 14/23
      F53A3.4a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F53A3.4a.1:c.3195+1954G>A
        Intron_number: 15/23
  Reference: WBPaper00037807
  Method: WGS_Pasadena_Quinlan