WormBase Tree Display for Variation: WBVar00025069

WBVar00025069 Evidence: Paper_evidence: WBPaper00030778
      WBPaper00055507
  Name: Public_name: WBVar00025069
    Other_name: cbs21918
      cb21918 Paper_evidence: WBPaper00055507
    HGVSg
  Sequence_details: SMap: S_parent: Sequence: cb25.fpc3857a
    Flanking_sequences: gcttccatcttttcacgaccgggta gggcaaatgaaaatgcgcttgattc
    Mapping_target: cb25.fpc3857a
    Type_of_mutation: Substitution: G C
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP: Reference_strain_digest: GTAC AfaI, Csp6I, RsaI 502 412 86
        CAC HindI 164 120 111 58 55 54 51 49 49 44 42 31 26 26 24 23 21 18 13 11 10
      Polymorphic_strain_digest: GTAC AfaI, Csp6I, RsaI 914 86
        CAC HindI 164 120 65 58 55 54 51 49 49 46 44 42 31 26 26 24 23 21 18 13 11 10
    Natural_variant
  Origin: Species: Caenorhabditis briggsae
    Strain: WBStrain00041077
    Laboratory: CP
    Person: WBPerson3706
      WBPerson227
      WBPerson225
    Status: Live
  Affects: Gene: WBGene00035221
    Transcript: CBG14830.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        Intron_number: 17/32
      CBG14830.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        Intron_number: 16/31
  Reference: WBPaper00030778
    WBPaper00055507
  Remark: Predicted by: CrossMatch, Polybayes, ssaha-SNP v1.0, ssaha-SNP v2.0
    This SNP was observed in 1 sequencing read(s)
  Method: SNP