WormBase Tree Display for Variation: WBVar00028609

WBVar00028609 Evidence: Paper_evidence: WBPaper00030778
      WBPaper00055507
  Name: Public_name: WBVar00028609
    Other_name: cbs24295
      cb24295 Paper_evidence: WBPaper00055507
    HGVSg: chrIII:g.8909447T>G
  Sequence_details: SMap: S_parent: Sequence: cb25.fpc2234
    Flanking_sequences: cgagatggaatcaaaatgttgtcga aatagtttctgagccgaatttgagt
    Mapping_target: cb25.fpc2234
    Type_of_mutation: Substitution: A G
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP: Reference_strain_digest: GTMKAC AccI, FblI, XmiI 1000
        GTYRAC HincII, HindII 1000
        GTNNAC Hpy8I 586 414
        GTCGAC SalI 1000
      Polymorphic_strain_digest: GTMKAC AccI, FblI, XmiI 504 496
        GTYRAC HincII, HindII 503 497
        GTNNAC Hpy8I 503 414 83
        GTCGAC SalI 505 495
    Natural_variant
  Origin: Species: Caenorhabditis briggsae
    Strain: WBStrain00041077
    Laboratory: CP
    Person: WBPerson3706
      WBPerson227
      WBPerson225
    Status: Live
  Affects: Gene: WBGene00031391
    Transcript: CBG09877.1 VEP_consequence: missense_variant
        VEP_impact: MODERATE
        HGVSc: CBG09877.1:c.1454T>G
        HGVSp: CBP37613.1:p.Lys485Arg
        cDNA_position: 1465
        CDS_position: 1454
        Protein_position: 485
        Exon_number: 6/7
        Codon_change: aAa/aGa
        Amino_acid_change: K/R
  Reference: WBPaper00030778
    WBPaper00055507
  Remark: Predicted by: CrossMatch, Polybayes, ssaha-SNP v1.0, ssaha-SNP v2.0
    This SNP was observed in 1 sequencing read(s)
  Method: SNP