WormBase Tree Display for Variation: WBVar00028614

WBVar00028614 Evidence: Paper_evidence: WBPaper00030778
      WBPaper00055507
  Name: Public_name: WBVar00028614
    Other_name: cbs24297
      cb24297 Paper_evidence: WBPaper00055507
    HGVSg
  Sequence_details: SMap: S_parent: Sequence: cb25.fpc2234
    Flanking_sequences: attttttttcggaaaattagaattt tcttgatcattgaattgtagtcaac
    Mapping_target: cb25.fpc2234
    Type_of_mutation: Substitution: C G
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP: Reference_strain_digest: TTCGAA AsuII, Bpu14I, BsiCI, Bsp119I, BspT104I, BstBI, Csp45I, LspI, NspV, SfuI 865 135
        TCGA EsaBC3I, TaqI, TthHB8I 379 195 160 132 118 16
      Polymorphic_strain_digest: TTCGAA AsuII, Bpu14I, BsiCI, Bsp119I, BspT104I, BstBI, Csp45I, LspI, NspV, SfuI 1000
        TCGA EsaBC3I, TaqI, TthHB8I 379 250 195 160 16
    Natural_variant
  Origin: Species: Caenorhabditis briggsae
    Strain: WBStrain00041077
    Laboratory: CP
    Person: WBPerson3706
      WBPerson227
      WBPerson225
    Status: Live
  Affects: Gene: WBGene00031399
    Transcript: CBG09886a.1 VEP_consequence: 3_prime_UTR_variant
        VEP_impact: MODIFIER
        cDNA_position: 1311
        Exon_number: 8/8
  Reference: WBPaper00030778
    WBPaper00055507
  Remark: Predicted by: CrossMatch, ssaha-SNP v1.0, ssaha-SNP v2.0
    This SNP was observed in 1 sequencing read(s)
  Method: SNP