WormBase Tree Display for Variation: WBVar00029199

WBVar00029199 Evidence: Paper_evidence: WBPaper00030778
  Name: Public_name: WBVar00029199
    Other_name: cbs24852
    HGVSg: chrX:g.8342001A>C
  Sequence_details: SMap: S_parent: Sequence: cb25.fpc3857a
    Flanking_sequences: cacttgttctctacatccccaccacccctcctcggtcttctcgcacctac ttaattgttccagattgccacttcatttgatgacactcgttggtccacat
    Mapping_target: cb25.fpc3857a
    Type_of_mutation: Substitution: T G
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP: Reference_strain_digest: CTNAG BstDEI, DdeI 687 313
      Polymorphic_strain_digest: CTNAG BstDEI, DdeI 500 313 187
    Natural_variant
  Origin: Species: Caenorhabditis briggsae
    Strain: WBStrain00041077
    Laboratory: CP
    Person: WBPerson3706
      WBPerson227
      WBPerson225
    Status: Live
  Affects: Gene: WBGene00034755
    Transcript: CBG14172a.1 VEP_consequence: 5_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: CBG14172a.1:c.-81T>G
        cDNA_position: 37
        Exon_number: 1/17
      CBG14172b.1 VEP_consequence: 5_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: CBG14172b.1:c.-81T>G
        cDNA_position: 37
        Exon_number: 1/16
  Reference: WBPaper00030778
  Remark: Predicted by: Polybayes, ssaha-SNP v2.0
    This SNP was observed in 1 sequencing read(s)
  Method: SNP