WormBase Tree Display for Variation: WBVar00035204
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WBVar00035204 | Evidence | Paper_evidence | WBPaper00030778 | |||
---|---|---|---|---|---|---|
WBPaper00055507 | ||||||
Name | Public_name | WBVar00035204 | ||||
Other_name | cbs27273 | |||||
cb27273 | Paper_evidence | WBPaper00055507 | ||||
Sequence_details | SMap | S_parent | Sequence | cb25.fpc2234 | ||
Flanking_sequences | aagtgcggcaaaaacgtaatatttcagattttcgcctcgttcgag | tactttcgtaattaagttcggtttt | ||||
Mapping_target | cb25.fpc2234 | |||||
Type_of_mutation | Substitution | G | T | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Predicted_SNP | ||||||
RFLP | Reference_strain_digest | AGCT | AluI | 370 331 146 65 64 24 | ||
RGCY | CviJI, CviTI | 213 157 155 155 146 65 64 24 21 | ||||
TCNNGA | Hpy178III, Hpy188III | 404 376 94 88 31 7 | ||||
Polymorphic_strain_digest | AGCT | AluI | 395 370 146 65 24 | |||
RGCY | CviJI, CviTI | 219 213 157 155 146 65 24 21 | ||||
TCNNGA | Hpy178III, Hpy188III | 376 322 94 88 82 31 7 | ||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis briggsae | ||||
Strain | WBStrain00041077 | |||||
Laboratory | CP | |||||
Person | WBPerson3706 | |||||
WBPerson227 | ||||||
WBPerson225 | ||||||
Status | Live | |||||
Reference | WBPaper00030778 | |||||
WBPaper00055507 | ||||||
Remark | Predicted by: ssaha-SNP v1.0, ssaha-SNP v2.0 | |||||
This SNP was observed in 1 sequencing read(s) | ||||||
Method | SNP |