WormBase Tree Display for Variation: WBVar00044269

WBVar00044269 Evidence: Paper_evidence: WBPaper00030778
      WBPaper00055507
  Name: Public_name: WBVar00044269
    Other_name: cbs33051
      cb33051 Paper_evidence: WBPaper00055507
    HGVSg: chrIV:g.7040108G>A
  Sequence_details: SMap: S_parent: Sequence: cb25.fpc0110
    Flanking_sequences: gaacggctctctgttccgagctcgt aaatcgtcgtcaccgccaaacggac
    Mapping_target: cb25.fpc0110
    Type_of_mutation: Substitution: C T
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP: Reference_strain_digest: TTAA MseI, Tru1I, Tru9I 667 142 92 45 30 24
      Polymorphic_strain_digest: TTAA MseI, Tru1I, Tru9I 475 192 142 92 45 30 24
    Natural_variant
  Origin: Species: Caenorhabditis briggsae
    Strain: WBStrain00041077
    Laboratory: CP
    Person: WBPerson3706
      WBPerson227
      WBPerson225
    Status: Live
  Affects: Gene: WBGene00027872
    Transcript: CBG05418.1 VEP_consequence: stop_gained
        VEP_impact: HIGH
        HGVSc: CBG05418.1:c.352C>T
        HGVSp: CBP07084.1:p.Gln118Ter
        cDNA_position: 378
        CDS_position: 352
        Protein_position: 118
        Exon_number: 3/4
        Codon_change: Caa/Taa
        Amino_acid_change: Q/*
  Reference: WBPaper00030778
    WBPaper00055507
  Remark: Predicted by: CrossMatch, Polybayes, ssaha-SNP v1.0, ssaha-SNP v2.0
    This SNP was observed in 1 sequencing read(s)
  Method: SNP