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WormBase Tree Display for Variation: WBVar00047574

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Name Class

WBVar00047574EvidencePaper_evidenceWBPaper00030778
WBPaper00055507
NamePublic_nameWBVar00047574
Other_namecbs34543
cb34543Paper_evidenceWBPaper00055507
HGVSgchrV:g.2338931T>A
Sequence_detailsSMapS_parentSequencecb25.NA_193
Flanking_sequencesacaggtgaggaataatttcacttttatctaatttatctcatttcctatca
Mapping_targetcb25.NA_193
Type_of_mutationSubstitutionTA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
RFLPReference_strain_digest (14)
Polymorphic_strain_digest (14)
Natural_variant
OriginSpeciesCaenorhabditis briggsae
StrainWBStrain00041077
LaboratoryCP
PersonWBPerson3706
WBPerson227
WBPerson225
StatusLive
AffectsGeneWBGene00042663
TranscriptCBG24588.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScCBG24588.1:c.726+22T>A
Intron_number3/4
ReferenceWBPaper00030778
WBPaper00055507
RemarkPredicted by: ssaha-SNP v1.0, ssaha-SNP v2.0
This SNP was observed in 1 sequencing read(s)
MethodSNP