WormBase Tree Display for Variation: WBVar00051996
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| WBVar00051996 | Name | Public_name | WBVar00051996 | ||
|---|---|---|---|---|---|
| Other_name | pas21996 | ||||
| cewivar00106334 | |||||
| R74.3.2:c.*95A>T | |||||
| R74.3.1:c.*135A>T | |||||
| HGVSg | CHROMOSOME_III:g.4195085A>T | ||||
| Sequence_details | SMap | S_parent | Sequence | R74 | |
| Flanking_sequences | tgtttatgtattaacttcataaatttccagagcccaagcggagagttcgatcgattcgttgctggctacattgaggaaggagcagacggttatgcagcgtcttgttcaagcggatccatgtacacatcttcagaaacgcgtgaaacactttcgccgaattccctagccatgtccccgtcgatgagcagctcgagcactgactgggatgatgagcttttgggatgtggaaccgaaactggaactggaaccgacgagctgcttaccgaccccggaaactggaactttgaaactttcgacgaa | attcaatcgacctaaatttcttccaaaattaatttatatctggtgtatcgttattgtagtgtcctagtgaatttccctcgttattattttctccccaaaaatctctccaaatttctccatttcctctctggtattttcttcttttcctcttttccttttgtacaaccccaactttcgtattattatttacccttattaaatttccctcccccaaagctcattgattccaattcccccatttgtatatttaataaaaacagccatacatttttgagatttgatcattttgtgcaggaactc | |||
| Mapping_target | R74 | ||||
| Type_of_mutation | Substitution | A | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00000034 | From_analysis | Million_mutation_project_reanalysis | ||
| WBStrain00004599 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00004604 | From_analysis | WGS_Pasadena_Quinlan | |||
| WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | |||
| Person | WBPerson6900 | ||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| Million_mutation_project_reanalysis | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00006959 | |||
| Transcript | R74.3.1 | VEP_consequence | 3_prime_UTR_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | R74.3.1:c.*135A>T | ||||
| cDNA_position | 1173 | ||||
| Exon_number | 5/5 | ||||
| R74.3.2 | VEP_consequence | 3_prime_UTR_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | R74.3.2:c.*95A>T | ||||
| cDNA_position | 1121 | ||||
| Exon_number | 6/6 | ||||
| Method | WGS_Pasadena_Quinlan |
