WormBase Tree Display for Variation: WBVar00052982
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| WBVar00052982 | Name | Public_name | WBVar00052982 | ||
|---|---|---|---|---|---|
| Other_name | CE4-184 | ||||
| haw59736 | |||||
| haw154716 | |||||
| cewivar00209620 | |||||
| C42C1.9a.1:c.83-55A>G | |||||
| HGVSg | CHROMOSOME_IV:g.12289683A>G | ||||
| Sequence_details | SMap | S_parent | Sequence | C42C1 | |
| Flanking_sequences | tggtggcaacgatattaaagttggatttgaatttatgttttgtaatattttctactctttcgtgaatttctatcaaccttactcgaatatcatgaaaagaattagtgattgttatggtatgttggccaggtattatggagacgcagaaaaatcaaacgctccgcccccaaacgttgggtctcgttaggtatttgcggaaaaaccacaaattccaacgtttttaaaatttttttgccgatttttattagtc | tttcattcttcacgcgtccaacataatataaacctattaattaagattttttagaggtttcaacgccaggaaagcagcacattttggagtgtaatatgagcaatcgagaaagtctgaacgagagtttgttcatggattatgagtatatttttgttttagaaaaactgaaaacaactaattttcagccaaatttctgaagactatgactttgtcacgtatgcgttgttgcgagagaagagatcgtctaaaa | |||
| Mapping_target | C42C1 | ||||
| Type_of_mutation | Substitution | a | g | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Confirmed_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (13) | |||||
| Laboratory | RW | ||||
| Person | WBPerson4037 | ||||
| WBPerson1562 | |||||
| Analysis | SNP_Swan | ||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WGS_Hawaiian_Waterston | |||||
| History | Acquires_merge | WBVar00574581 | |||
| WBVar00192460 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00016587 | |||
| Transcript | C42C1.9a.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | C42C1.9a.1:c.83-55A>G | ||||
| Intron_number | 2/7 | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00005369 | |||||
| Method | SNP_Swan |
