WormBase Tree Display for Variation: WBVar00054707
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WBVar00054707 | Evidence | Person_evidence | WBPerson460 | ||||||
---|---|---|---|---|---|---|---|---|---|
Name | Public_name | cu11 | |||||||
HGVSg | CHROMOSOME_X:g.13075135_13076401del | ||||||||
Sequence_details | SMap | S_parent | Sequence | K03A11 | |||||
Flanking_sequences | tttccggttcaggaactttgggctcttcag | aatcgtaaccaacaaaacgatatttgatga | |||||||
Mapping_target | K03A11 | ||||||||
Type_of_mutation | Deletion | ||||||||
SeqStatus | Sequenced | ||||||||
Variation_type | Allele | ||||||||
Origin | Species | Caenorhabditis elegans | |||||||
Strain | WBStrain00029949 | ||||||||
Laboratory | OK | ||||||||
Status | Live | ||||||||
Affects | Gene | WBGene00000450 | |||||||
Transcript | K03A11.3.1 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,3_prime_UTR_variant,intron_variant | ||||||
VEP_impact | HIGH | ||||||||
Intron_number | 3-5/6 | ||||||||
Exon_number | 4-7/7 | ||||||||
Interactor | WBInteraction000521449 | ||||||||
WBInteraction000524597 | |||||||||
WBInteraction000524598 | |||||||||
WBInteraction000524599 | |||||||||
WBInteraction000524602 | |||||||||
WBInteraction000541820 | |||||||||
Isolation | Mutagen | UV/TMP | Person_evidence | WBPerson460 | |||||
Genetics | Interpolated_map_position | X | 10.2062 | ||||||
Description | Phenotype | WBPhenotype:0000901 | Paper_evidence | WBPaper00045065 | |||||
Curator_confirmed | WBPerson460 | ||||||||
WBPhenotype:0001278 | Paper_evidence | WBPaper00045065 | |||||||
Curator_confirmed | WBPerson460 | ||||||||
Remark | loss of dbl-1::gfp expression in the M4 pharyngeal neuron | Paper_evidence | WBPaper00045065 | ||||||
Curator_confirmed | WBPerson460 | ||||||||
EQ_annotations | Anatomy_term | WBbt:0004467 | PATO:0000460 | Paper_evidence | WBPaper00045065 | ||||
Curator_confirmed | WBPerson460 | ||||||||
WBPhenotype:0001281 | Person_evidence | WBPerson460 | |||||||
Curator_confirmed | WBPerson48 | ||||||||
Penetrance | Complete | Person_evidence | WBPerson460 | ||||||
Curator_confirmed | WBPerson48 | ||||||||
Recessive | Person_evidence | WBPerson460 | |||||||
Curator_confirmed | WBPerson48 | ||||||||
Phenotype_not_observed | WBPhenotype:0000062 | Person_evidence | WBPerson460 | ||||||
Curator_confirmed | WBPerson48 | ||||||||
Reference | WBPaper00045065 | ||||||||
Method | Deletion_allele |