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WormBase Tree Display for Variation: WBVar00057374

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Name Class

WBVar00057374EvidencePaper_evidenceWBPaper00030778
WBPaper00055507
NamePublic_nameWBVar00057374
Other_namecbs39322
cb39322Paper_evidenceWBPaper00055507
HGVSgchrV:g.13839217C>A
Sequence_detailsSMapS_parentSequencecb25.fpc4126
Flanking_sequencesctttgatctccgttacgtaaaaacctaaaaaccgctgtccgtgaggcggt
Mapping_targetcb25.fpc4126
Type_of_mutationSubstitutionCA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
RFLPReference_strain_digest (32)
Polymorphic_strain_digest (32)
Natural_variant
OriginSpeciesCaenorhabditis briggsae
StrainWBStrain00041077
LaboratoryCP
PersonWBPerson3706
WBPerson227
WBPerson225
StatusLive
AffectsGeneWBGene00038612
TranscriptCBG19377.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScCBG19377.1:c.1470+256C>A
Intron_number8/8
ReferenceWBPaper00030778
WBPaper00055507
RemarkPredicted by: CrossMatch, Polybayes, ssaha-SNP v2.0
This SNP was observed in 2 sequencing read(s)
MethodSNP