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WormBase Tree Display for Variation: WBVar00059836

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Name Class

WBVar00059836EvidencePaper_evidenceWBPaper00040097
NamePublic_nameWBVar00059836
Other_namehaw43089
LSJ2_100
cewivar00023207
F54D8.2.2:c.136+17A>T
F54D8.2.1:c.136+17A>T
F54D8.2.4:c.136+17A>T
F54D8.2.3:c.136+17A>T
HGVSgCHROMOSOME_III:g.5081887A>T
Sequence_detailsSMapS_parentSequenceF54D8
Flanking_sequencesaagctcacagtaagtgtttttttttaaataaatagtttctattttgatgt
Mapping_targetF54D8
Type_of_mutationSubstitutionAT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (29)
LaboratoryRW
CX
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
WGS_McGrath
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar00601381
StatusLive
AffectsGeneWBGene00006519
TranscriptF54D8.2.4VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF54D8.2.4:c.136+17A>T
Intron_number2/4
F54D8.2.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF54D8.2.2:c.136+17A>T
Intron_number2/4
F54D8.2.3VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF54D8.2.3:c.136+17A>T
Intron_number2/4
F54D8.2.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF54D8.2.1:c.136+17A>T
Intron_number2/4
ReferenceWBPaper00040097
Remark[20081124 db] this Variation was previously named hw43089
MethodWGS_Hawaiian_Waterston