WormBase Tree Display for Variation: WBVar00059886
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WBVar00059886 | Evidence | Paper_evidence | WBPaper00038208 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00059886 | |||
Other_name | haw43099 | ||||
haw143327 | |||||
cewivar00196522 | |||||
F54D8.6.1:c.324A>G | |||||
CE47843:p.Glu108= | |||||
HGVSg | CHROMOSOME_III:g.5103314A>G | ||||
Sequence_details | SMap | S_parent | Sequence | F54D8 | |
Flanking_sequences | atgaacaaagagaatccttcatgga | atgtttagaatagctccgagaattc | |||
Mapping_target | F54D8 | ||||
Type_of_mutation | Substitution | A | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00563192 | |||
Status | Live | ||||
Affects | Gene | WBGene00018802 | |||
Transcript | F54D8.6.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | F54D8.6.1:c.324A>G | ||||
HGVSp | CE47843:p.Glu108= | ||||
cDNA_position | 330 | ||||
CDS_position | 324 | ||||
Protein_position | 108 | ||||
Exon_number | 2/15 | ||||
Codon_change | gaA/gaG | ||||
Amino_acid_change | E | ||||
Reference | WBPaper00038208 | ||||
Remark | [20081124 db] this Variation was previously named hw43099 | ||||
Method | WGS_Hawaiian_Waterston |