WormBase Tree Display for Variation: WBVar00064644
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| WBVar00064644 | Name | Public_name | WBVar00064644 | ||
|---|---|---|---|---|---|
| Other_name | pas24526 | ||||
| haw107191 | |||||
| cewivar00061552 | |||||
| F31B12.1d.1:c.309-172G>A | |||||
| F31B12.1j.1:c.309-172G>A | |||||
| F31B12.1i.1:c.309-172G>A | |||||
| F31B12.1h.1:c.309-172G>A | |||||
| F31B12.1k.1:c.309-172G>A | |||||
| F31B12.1g.1:c.309-172G>A | |||||
| F31B12.1l.1:c.309-172G>A | |||||
| HGVSg | CHROMOSOME_X:g.10831048C>T | ||||
| Sequence_details | SMap | S_parent | Sequence | C05A9 | |
| Flanking_sequences | aaagacgagaaactgaagaaaagaataaggaagtattacttgacccagaggaataaataataaaaactaggactcacctcgagcattatttctgacaagttctgggtaactgatggtttgcggtcatccctgaaaaaatgacggcggattttacgagtagatcgtgatatgcgcatttggttttcaactttttgaactgttcgaatcatgttcaatttcagtgttttatatcttttatacgttttagctgaccatagatcttgtgaagacaatgagataacactgaaaccaaaaaaagac | actccttaattcaatttttatacaacaatacagaagctgtctctatttttattcactatgcatgatgttgttttcttagtgctcctagagctgttcttcttatatttgtgtttggtcattttttgaacattcaaaaaactaacgtttttgaacagaacatttgtaccattttattgaattgaatggaaatatatttggcactgacattttactgaatgtgcaacctaatgtaagcagtgggaggcggaaaaattattattcaggtttttcgattagggatgaatttataacgttcacgtt | |||
| Mapping_target | C05A9 | ||||
| Type_of_mutation | Substitution | C | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (41) | |||||
| Laboratory | RW | ||||
| Person | WBPerson6900 | ||||
| WBPerson1562 | |||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| Million_mutation_project_reanalysis | |||||
| WGS_Hawaiian_Waterston | |||||
| History | Acquires_merge | WBVar00082831 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00004036 | |||
| Transcript | F31B12.1j.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | F31B12.1j.1:c.309-172G>A | ||||
| Intron_number | 4/63 | ||||
| F31B12.1g.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F31B12.1g.1:c.309-172G>A | ||||
| Intron_number | 4/63 | ||||
| F31B12.1d.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F31B12.1d.1:c.309-172G>A | ||||
| Intron_number | 4/64 | ||||
| F31B12.1h.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F31B12.1h.1:c.309-172G>A | ||||
| Intron_number | 4/63 | ||||
| F31B12.1l.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F31B12.1l.1:c.309-172G>A | ||||
| Intron_number | 4/63 | ||||
| F31B12.1i.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F31B12.1i.1:c.309-172G>A | ||||
| Intron_number | 4/64 | ||||
| F31B12.1k.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F31B12.1k.1:c.309-172G>A | ||||
| Intron_number | 4/64 | ||||
| Method | WGS_Pasadena_Quinlan |
