WormBase Tree Display for Variation: WBVar00076889
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| WBVar00076889 | Name | Public_name | WBVar00076889 | ||
|---|---|---|---|---|---|
| Other_name | haw101249 | ||||
| cewivar00271548 | |||||
| K10B3.5.1:c.1577T>C | |||||
| K10B3.5.2:c.1577T>C | |||||
| CE53537:p.Phe526Ser | |||||
| HGVSg | CHROMOSOME_X:g.3103828A>G | ||||
| Sequence_details | SMap | S_parent | Sequence | K10B3 | |
| Flanking_sequences | taagatgtagctaactcgattgttg | aagtagctggagtaaactgtttttt | |||
| Mapping_target | K10B3 | ||||
| Type_of_mutation | Substitution | A | G | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
| WGS_Hawaiian_Waterston | |||||
| WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022868 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022878 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022886 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| Million_mutation_project_reanalysis | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00019611 | |||
| Transcript | K10B3.5.1 | VEP_consequence | missense_variant | ||
| VEP_impact | MODERATE | ||||
| HGVSc | K10B3.5.1:c.1577T>C | ||||
| HGVSp | CE53537:p.Phe526Ser | ||||
| cDNA_position | 1852 | ||||
| CDS_position | 1577 | ||||
| Protein_position | 526 | ||||
| Exon_number | 7/9 | ||||
| Codon_change | tTc/tCc | ||||
| Amino_acid_change | F/S | ||||
| K10B3.5.2 | VEP_consequence | missense_variant | |||
| VEP_impact | MODERATE | ||||
| HGVSc | K10B3.5.2:c.1577T>C | ||||
| HGVSp | CE53537:p.Phe526Ser | ||||
| cDNA_position | 1591 | ||||
| CDS_position | 1577 | ||||
| Protein_position | 526 | ||||
| Exon_number | 6/8 | ||||
| Codon_change | tTc/tCc | ||||
| Amino_acid_change | F/S | ||||
| Remark | [20081124 db] this Variation was previously named hw101249 | ||||
| Method | WGS_Hawaiian_Waterston |
