WormBase Tree Display for Variation: WBVar00086122

WBVar00086122 Name: Public_name: WBVar00086122
    Other_name: haw110482
      cewivar00063201
      R07D5.1e.1:c.267+5677A>T
      R07D5.1c.1:c.-166+5677A>T
      R07D5.1a.1:c.-8-8821A>T
      R07D5.1d.1:c.267+5677A>T
    HGVSg: CHROMOSOME_X:g.15136403T>A
  Sequence_details: SMap: S_parent: Sequence: R07D5
    Flanking_sequences: caacatgggacactttgacactacg atatttttgcgatttaaaaaatgtc
    Mapping_target: R07D5
    Type_of_mutation: Substitution: T A
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain (36)
    Laboratory: RW
    Person: WBPerson1562
    Analysis: WGS_Hawaiian_Waterston
      Million_mutation_project_reanalysis
    Status: Live
  Affects: Gene: WBGene00006747
    Transcript: R07D5.1c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: R07D5.1c.1:c.-166+5677A>T
        Intron_number: 1/11
      R07D5.1a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: R07D5.1a.1:c.-8-8821A>T
        Intron_number: 1/12
      R07D5.1d.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: R07D5.1d.1:c.267+5677A>T
        Intron_number: 1/9
      R07D5.1e.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: R07D5.1e.1:c.267+5677A>T
        Intron_number: 1/10
  Remark: [20081124 db] this Variation was previously named hw110482
  Method: WGS_Hawaiian_Waterston