WormBase Tree Display for Variation: WBVar00090156
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| WBVar00090156 | Evidence | Paper_evidence | WBPaper00003566 | ||||
|---|---|---|---|---|---|---|---|
| Name | Public_name | n1402 | |||||
| Other_name | C09H6.2c.1:c.1153C>T | ||||||
| C09H6.2b.1:c.1222C>T | |||||||
| C09H6.2a.1:c.1306C>T | |||||||
| CE27060:p.Gln408Ter | |||||||
| CE15610:p.Gln436Ter | |||||||
| CE42752:p.Gln385Ter | |||||||
| HGVSg | CHROMOSOME_I:g.8114660G>A | ||||||
| Sequence_details | SMap | S_parent | Sequence | C09H6 | |||
| Flanking_sequences | gagcaactagccgctgcgtttgctcaacaa | aaattgcacaatccgctgctccaactccatt | |||||
| Mapping_target | C09H6 | ||||||
| Type_of_mutation | Substitution | c | t | Paper_evidence | WBPaper00003566 | ||
| SeqStatus | Sequenced | ||||||
| Variation_type | Allele | ||||||
| Origin | Species | Caenorhabditis elegans | |||||
| Strain | WBStrain00027051 | ||||||
| Laboratory | MT | ||||||
| Status | Live | ||||||
| Affects | Gene | WBGene00002999 | |||||
| Transcript | C09H6.2c.1 | VEP_consequence | stop_gained | ||||
| VEP_impact | HIGH | ||||||
| HGVSc | C09H6.2c.1:c.1153C>T | ||||||
| HGVSp | CE42752:p.Gln385Ter | ||||||
| cDNA_position | 1153 | ||||||
| CDS_position | 1153 | ||||||
| Protein_position | 385 | ||||||
| Exon_number | 8/15 | ||||||
| Codon_change | Caa/Taa | ||||||
| Amino_acid_change | Q/* | ||||||
| C09H6.2b.1 | VEP_consequence | stop_gained | |||||
| VEP_impact | HIGH | ||||||
| HGVSc | C09H6.2b.1:c.1222C>T | ||||||
| HGVSp | CE27060:p.Gln408Ter | ||||||
| cDNA_position | 1225 | ||||||
| CDS_position | 1222 | ||||||
| Protein_position | 408 | ||||||
| Exon_number | 9/17 | ||||||
| Codon_change | Caa/Taa | ||||||
| Amino_acid_change | Q/* | ||||||
| C09H6.2a.1 | VEP_consequence | stop_gained | |||||
| VEP_impact | HIGH | ||||||
| HGVSc | C09H6.2a.1:c.1306C>T | ||||||
| HGVSp | CE15610:p.Gln436Ter | ||||||
| cDNA_position | 1307 | ||||||
| CDS_position | 1306 | ||||||
| Protein_position | 436 | ||||||
| Exon_number | 10/18 | ||||||
| Codon_change | Caa/Taa | ||||||
| Amino_acid_change | Q/* | ||||||
| Genetics | Interpolated_map_position | I | 2.55887 | ||||
| Reference | WBPaper00003566 | ||||||
| Method | Substitution_allele |
