WormBase Tree Display for Variation: WBVar00090662
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| WBVar00090662 | Evidence | Paper_evidence | WBPaper00005229 | ||
|---|---|---|---|---|---|
| Name | Public_name | n3098 | |||
| Other_name | F45B8.4.1:c.339G>A | ||||
| CE24977:p.Trp113Ter | |||||
| HGVSg | CHROMOSOME_X:g.14954042C>T | ||||
| Sequence_details | SMap | S_parent | Sequence | F45B8 | |
| Flanking_sequences | acattaatatgtattttaagcttcagtttg | aatcgaacaccgacacctccagtggaaatc | |||
| Mapping_target | F45B8 | ||||
| Type_of_mutation | Substitution | g | a | ||
| SeqStatus | Sequenced | ||||
| Variation_type | Allele | ||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00027353 | ||||
| Laboratory | MT | ||||
| Status | Live | ||||
| Affects | Gene | WBGene00003909 | |||
| Transcript | F45B8.4.1 | VEP_consequence | stop_gained | ||
| VEP_impact | HIGH | ||||
| HGVSc | F45B8.4.1:c.339G>A | ||||
| HGVSp | CE24977:p.Trp113Ter | ||||
| cDNA_position | 466 | ||||
| CDS_position | 339 | ||||
| Protein_position | 113 | ||||
| Exon_number | 5/12 | ||||
| Codon_change | tgG/tgA | ||||
| Amino_acid_change | W/* | ||||
| Genetics | Interpolated_map_position | X | 21.5929 | ||
| Description | Phenotype | WBPhenotype:0000643 | Paper_evidence | WBPaper00005229 | |
| Curator_confirmed | WBPerson88 | ||||
| Disease_info | Models_disease | DOID:1574 | |||
| Models_disease_in_annotation | WBDOannot00000696 | ||||
| Reference | WBPaper00005229 | ||||
| Method | Substitution_allele |
