WormBase Tree Display for Variation: WBVar00091543

WBVar00091543 Evidence: Paper_evidence: WBPaper00029155
  Name: Public_name: ok240
    HGVSg: CHROMOSOME_V:g.12786952_12788478del
  Sequence_details: SMap: S_parent: Sequence: ZC455
    Flanking_sequences: caggaatcacagcgtcgatatttgttgtgg tcgacagtttttgcaaacgataagagctgg
    Mapping_target: ZC455
    Type_of_mutation: Deletion
    PCR_product: OK240_external
      OK240_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00031914
    Laboratory: RB
    Person: WBPerson46
      WBPerson466
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00001429
      WBGene00013909
    Transcript: ZC455.10.1 VEP_consequence: coding_sequence_variant,5_prime_UTR_variant
        VEP_impact: MODIFIER
        cDNA_position: ?-175
        CDS_position: ?-48
        Protein_position: ?-16
        Exon_number: 1-2/6
      ZC455.9.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,3_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        cDNA_position: 74-?
        CDS_position: 74-?
        Protein_position: 25-?
        Intron_number: 1-4/4
        Exon_number: 1-5/5
  Genetics: Mapping_data: In_multi_point: 4308
  Reference: WBPaper00029155
  Remark: Allele sequenced by Antony Page Paper_evidence: WBPaper00029155
    Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele