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WormBase Tree Display for Variation: WBVar00091557

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Name Class

WBVar00091557NamePublic_nameok256
HGVSgCHROMOSOME_I:g.6315571_6317352del
Sequence_detailsSMapS_parentSequenceF26B1
Flanking_sequencesCAATTCGGAATCGGAGCTCGAGGAGCCAGATCCGCGTTTTTGTCTATGTGTTCGTCGCGGG
Mapping_targetF26B1
Type_of_mutationDeletion
PCR_productok256_external
ok256_internal
SeqStatusSequenced
Variation_typeAllele
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00003849
WBStrain00003850
WBStrain00003851
WBStrain00040617
LaboratoryRB
PersonWBPerson46
KO_consortium_allele
StatusLive
AffectsGeneWBGene00002073
TranscriptF26B1.3.1VEP_consequencesplice_acceptor_variant,splice_donor_variant,coding_sequence_variant,3_prime_UTR_variant,intron_variant
VEP_impactHIGH
cDNA_position245-?
CDS_position231-?
Protein_position77-?
Intron_number3-5/6
Exon_number3-7/7
GeneticsMapping_dataIn_multi_point4438
RemarkKnockout allele sequenced by the Vancouver Gene Knockout Lab (part of the C. elegans Gene Knockout Consortium)
Last updated on 29 Nov 2002
Sequenced by the C. elegans Gene Knockout ConsortiumPaper_evidenceWBPaper00041807
MethodKO_consortium_allele