WormBase Tree Display for Variation: WBVar00091565
expand all nodes | collapse all nodes | view schema
WBVar00091565 | Name | Public_name | ok265 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | ZK154.7.1:c.1257+3_1869delinsC | |||||||
HGVSg | CHROMOSOME_X:g.7795622_7796468delinsG | |||||||
Sequence_details | SMap | S_parent | Sequence | ZK154 | ||||
Flanking_sequences | cttacaaactcctccagtagtctggaaagt | accacattgttggcatcgtatcctttctga | ||||||
Mapping_target | ZK154 | |||||||
Type_of_mutation | Insertion | G | ||||||
Deletion | ||||||||
PCR_product | ok265_external | |||||||
ok265_internal | ||||||||
SeqStatus | Sequenced | |||||||
Variation_type | Allele | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00005376 | |||||||
WBStrain00035664 | ||||||||
Laboratory | RB | |||||||
Person | WBPerson46 | |||||||
KO_consortium_allele | ||||||||
Status | Live | |||||||
Affects | Gene | WBGene00000075 | ||||||
Transcript | ZK154.7.1 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant | |||||
VEP_impact | HIGH | |||||||
HGVSc | ZK154.7.1:c.1257+3_1869delinsC | |||||||
cDNA_position | ?-1885 | |||||||
CDS_position | ?-1869 | |||||||
Protein_position | ?-623 | |||||||
Intron_number | 9-13/16 | |||||||
Exon_number | 10-14/17 | |||||||
Isolation | Mutagen | UV/TMP | ||||||
Genetics | Mapping_data | In_multi_point | 4144 | |||||
Description | Phenotype_not_observed | WBPhenotype:0000886 | Person_evidence | WBPerson274 | ||||
Curator_confirmed | WBPerson48 | |||||||
Penetrance | Complete | Person_evidence | WBPerson274 | |||||
Curator_confirmed | WBPerson48 | |||||||
Recessive | Person_evidence | WBPerson274 | ||||||
Curator_confirmed | WBPerson48 | |||||||
Variation_effect | Loss_of_function_undetermined_extent | Person_evidence | WBPerson274 | |||||
Curator_confirmed | WBPerson48 | |||||||
Remark | Sequenced by the C. elegans Gene Knockout Consortium | Paper_evidence | WBPaper00041807 | |||||
Method | KO_consortium_allele |