WormBase Tree Display for Variation: WBVar00091624

WBVar00091624 Name: Public_name: ok326
    HGVSg: CHROMOSOME_IV:g.16308707_16311089del
  Sequence_details: SMap: S_parent: Sequence: K03D3
    Flanking_sequences: aattgggctttttccttataatctcgaatt caaatgtgtcgtcgttggtgacggagccgt
    Mapping_target: K03D3
    Type_of_mutation: Deletion
    PCR_product: OK326_external
      OK326_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00035523
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00044670
      WBGene00004287
    Transcript: K03D3.10.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,3_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        Intron_number: 1-3/3
        Exon_number: 2-4/4
    Pseudogene: K03D3.13 VEP_consequence: non_coding_transcript_exon_variant
        VEP_impact: MODIFIER
        cDNA_position: ?-11
        Exon_number: 1/5
    Interactor: WBInteraction000524754
  Genetics: Mapping_data: In_multi_point: 4621
  Description: Phenotype: WBPhenotype:0000195 Paper_evidence: WBPaper00046150
        Curator_confirmed: WBPerson557
        Remark: Anterior distal tip cells (DTCs) overshoot the vulval region because of a defect in cessation of their migration. Paper_evidence: WBPaper00046150
            Curator_confirmed: WBPerson557
        Variation_effect: Loss_of_function_undetermined_extent: Paper_evidence: WBPaper00046150
            Curator_confirmed: WBPerson557
    Phenotype_not_observed: WBPhenotype:0000631 Paper_evidence: WBPaper00035198
        Curator_confirmed: WBPerson712
        Remark: Animals do not exhibit anterior convulsions when treated with pentylenetetrazole(PTZ). Paper_evidence: WBPaper00035198
            Curator_confirmed: WBPerson712
        Affected_by: Molecule: WBMol:00004251 Paper_evidence: WBPaper00035198
              Curator_confirmed: WBPerson712
      WBPhenotype:0001652 Paper_evidence: WBPaper00032446
        Curator_confirmed: WBPerson2021
  Reference: WBPaper00032446
    WBPaper00035198
    WBPaper00046150
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele