WormBase Tree Display for Variation: WBVar00091682
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WBVar00091682 | Name | Public_name | ok387 | ||
---|---|---|---|---|---|
Other_name | C32A3.1b.1:c.466-572_783+89del | ||||
C32A3.1a.1:c.532-572_849+89del | |||||
HGVSg | CHROMOSOME_III:g.3615288_3616266del | ||||
Sequence_details | SMap | S_parent | Sequence | C32A3 | |
Flanking_sequences | ttcgatttttcaattttccagaaaattaat | aaaaaaaagaaaaatagccgtcattttaag | |||
Mapping_target | C32A3 | ||||
Type_of_mutation | Deletion | ||||
PCR_product | ok387_external | ||||
ok387_internal | |||||
SeqStatus | Sequenced | ||||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00035670 | ||||
Laboratory | RB | ||||
Person | WBPerson46 | ||||
KO_consortium_allele | |||||
Status | Live | ||||
Affects | Gene | WBGene00004765 | |||
Transcript | C32A3.1a.1 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant | ||
VEP_impact | HIGH | ||||
HGVSc | C32A3.1a.1:c.532-572_849+89del | ||||
Intron_number | 4-5/7 | ||||
Exon_number | 5/8 | ||||
C32A3.1b.1 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant | |||
VEP_impact | HIGH | ||||
HGVSc | C32A3.1b.1:c.466-572_783+89del | ||||
Intron_number | 3-4/6 | ||||
Exon_number | 4/7 | ||||
Isolation | Mutagen | UV/TMP | |||
Remark | Sequenced by the C. elegans Gene Knockout Consortium | Paper_evidence | WBPaper00041807 | ||
Method | KO_consortium_allele |