WormBase Tree Display for Variation: WBVar00091721
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| WBVar00091721 | Name | Public_name | ok427 | ||
|---|---|---|---|---|---|
| HGVSg | CHROMOSOME_I:g.5007302_5008378del | ||||
| Sequence_details | SMap | S_parent | Sequence | F54C1 | |
| Flanking_sequences | atatttcaacatattgaaatgttctgtcta | CTACTGCCAAAGTACACAGGCAAAAGGCAT | |||
| Mapping_target | F54C1 | ||||
| Type_of_mutation | Deletion | ||||
| PCR_product | OK427_external | ||||
| OK427_internal | |||||
| SeqStatus | Sequenced | ||||
| Variation_type | Allele | ||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00031410 | ||||
| Laboratory | RB | ||||
| Person | WBPerson46 | ||||
| KO_consortium_allele | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00006058 | |||
| Transcript | F54C1.9.1 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,3_prime_UTR_variant,intron_variant | ||
| VEP_impact | HIGH | ||||
| Intron_number | 3-4/5 | ||||
| Exon_number | 4-6/6 | ||||
| Isolation | Mutagen | UV/TMP | |||
| Genetics | Mapping_data | In_multi_point | 4706 | ||
| Remark | Sequenced by the C. elegans Gene Knockout Consortium | Paper_evidence | WBPaper00041807 | ||
| Method | KO_consortium_allele |
