WormBase Tree Display for Variation: WBVar00091746
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WBVar00091746 | Name | Public_name | ok455 | ||
---|---|---|---|---|---|
HGVSg | CHROMOSOME_X:g.13422406_13423810del | ||||
Sequence_details | SMap | S_parent | Sequence | C29F7 | |
Flanking_sequences | caaatatccaacaactttgcccattccaag | agcagaaataggggtgcaagactattagag | |||
Mapping_target | C29F7 | ||||
Type_of_mutation | Deletion | ||||
PCR_product | ok455_external | ||||
ok455_internal | |||||
SeqStatus | Sequenced | ||||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00035609 | ||||
Laboratory | RB | ||||
Person | WBPerson46 | ||||
KO_consortium_allele | |||||
Status | Live | ||||
Affects | Gene | WBGene00001435 | |||
WBGene00305293 | |||||
Transcript | C29F7.12 | ||||
C29F7.4a.1 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant | |||
VEP_impact | HIGH | ||||
cDNA_position | ?-805 | ||||
CDS_position | ?-792 | ||||
Protein_position | ?-264 | ||||
Intron_number | 2-3/4 | ||||
Exon_number | 1-4/5 | ||||
C29F7.4b.1 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant | |||
VEP_impact | HIGH | ||||
cDNA_position | ?-725 | ||||
CDS_position | ?-717 | ||||
Protein_position | ?-239 | ||||
Intron_number | 2-4/5 | ||||
Exon_number | 1-5/6 | ||||
Isolation | Mutagen | UV/TMP | |||
Genetics | Mapping_data | In_multi_point | 4311 | ||
Remark | Sequenced by the C. elegans Gene Knockout Consortium | Paper_evidence | WBPaper00041807 | ||
Method | KO_consortium_allele |