WormBase Tree Display for Variation: WBVar00091751
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| WBVar00091751 | Name | Public_name | ok460 | ||||
|---|---|---|---|---|---|---|---|
| Other_name | Y48G9A.4b.1:c.2383+657_2922+296del | ||||||
| Y48G9A.4a.1:c.2128+657_2667+296del | |||||||
| HGVSg | CHROMOSOME_III:g.2146693_2148267del | ||||||
| Sequence_details | SMap | S_parent | Sequence | Y48G9A | |||
| Flanking_sequences | tgcgtgggctctgcggtgtttgcgtacttt | tggcgctaccgtaacccgagaaattcaaat | |||||
| Mapping_target | Y48G9A | ||||||
| Type_of_mutation | Deletion | ||||||
| PCR_product | OK460_external | ||||||
| OK460_internal | |||||||
| SeqStatus | Sequenced | ||||||
| Variation_type | Allele | ||||||
| Origin | Species | Caenorhabditis elegans | |||||
| Strain | WBStrain00031434 | ||||||
| Laboratory | RB | ||||||
| Person | WBPerson46 | ||||||
| KO_consortium_allele | |||||||
| Status | Live | ||||||
| Affects | Gene | WBGene00021698 | |||||
| Transcript | Y48G9A.4b.1 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant | ||||
| VEP_impact | HIGH | ||||||
| HGVSc | Y48G9A.4b.1:c.2383+657_2922+296del | ||||||
| Intron_number | 11-12/15 | ||||||
| Exon_number | 12/16 | ||||||
| Y48G9A.4a.1 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant | |||||
| VEP_impact | HIGH | ||||||
| HGVSc | Y48G9A.4a.1:c.2128+657_2667+296del | ||||||
| Intron_number | 8-9/12 | ||||||
| Exon_number | 9/13 | ||||||
| Isolation | Mutagen | UV/TMP | |||||
| Description | Phenotype_not_observed | WBPhenotype:0000087 | Paper_evidence | WBPaper00041258 | |||
| Curator_confirmed | WBPerson3809 | ||||||
| Remark | normal-sized body-wall muscle cells. | Paper_evidence | WBPaper00041258 | ||||
| Curator_confirmed | WBPerson3809 | ||||||
| Reference | WBPaper00041258 | ||||||
| Remark | Sequenced by the C. elegans Gene Knockout Consortium | Paper_evidence | WBPaper00041807 | ||||
| Method | KO_consortium_allele |
