WormBase Tree Display for Variation: WBVar00091752

WBVar00091752 Evidence: Paper_evidence: WBPaper00038487
  Name: Public_name: ok461
    HGVSg: CHROMOSOME_X:g.1916677_1917838del
  Sequence_details: SMap: S_parent: Sequence: ZC53
    Flanking_sequences: tattaaagcgttgccggagtgattgatagg aaaaaataagttaagttttttaaaatcacc
    Mapping_target: ZC53
    Type_of_mutation: Deletion
    PCR_product: OK461_external
      OK461_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00031436
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00004352
      WBGene00022512
    Transcript: ZC53.7.1 VEP_consequence: splice_acceptor_variant,coding_sequence_variant,3_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        Intron_number: 5/6
        Exon_number: 6-7/7
      ZC53.6.1 VEP_consequence: splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        Intron_number: 1/5
        Exon_number: 1/6
  Isolation: Mutagen: UV/TMP
  Genetics: Mapping_data: In_multi_point: 5037
  Description: Phenotype_not_observed: WBPhenotype:0002469 Paper_evidence: WBPaper00038487
        Curator_confirmed: WBPerson712
        Remark: The probability and size of response to plate taps decreased with continued taps applied with a 10s interval, similar to the response of N2 animals. Paper_evidence: WBPaper00038487
            Curator_confirmed: WBPerson712
      WBPhenotype:0004027 Paper_evidence: WBPaper00038487
        Curator_confirmed: WBPerson712
        Remark: Animals exhibit an escape response (reversal) similar to N2 animals upon an initial plate tap. Paper_evidence: WBPaper00038487
            Curator_confirmed: WBPerson712
  Reference: WBPaper00038487
  Remark: Last updated on 29 Nov 2002
    Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele