WormBase Tree Display for Variation: WBVar00091762

WBVar00091762 Name: Public_name: ok474
    HGVSg: CHROMOSOME_III:g.855859_856771del
  Sequence_details: SMap: S_parent: Sequence: K02F3
    Flanking_sequences: gttgggtatgctaaatatttagtagaccca TGTTAGTGACCGATCTCAACCAGCTAAATG
    Mapping_target: K02F3
    Type_of_mutation: Deletion
    PCR_product: OK474_external
      OK474_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00035652
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00006430
      WBGene00019334
    Transcript: K02F3.12a.1 VEP_consequence: splice_region_variant,coding_sequence_variant,5_prime_UTR_variant
        VEP_impact: LOW
        cDNA_position: ?-212
        CDS_position: ?-197
        Protein_position: ?-66
        Exon_number: 1-2/7
      K02F3.1.1 VEP_consequence: splice_acceptor_variant,coding_sequence_variant,3_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        Intron_number: 4/5
        Exon_number: 5-6/6
      K02F3.12b.1 VEP_consequence: splice_region_variant,coding_sequence_variant,5_prime_UTR_variant
        VEP_impact: LOW
        cDNA_position: ?-133
        CDS_position: ?-128
        Protein_position: ?-43
        Exon_number: 1-2/6
  Isolation: Mutagen: UV/TMP
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele