WormBase Tree Display for Variation: WBVar00091779

WBVar00091779 Name: Public_name: ok491
    HGVSg: CHROMOSOME_IV:g.10492112_10493585del
  Sequence_details: SMap: S_parent: Sequence: C02F4
    Flanking_sequences: tcatttgacagtcatcgtagatatgttgag aagataaaagtttcagaggtttatagactt
    Mapping_target: C02F4
    Type_of_mutation: Deletion
    PCR_product: OK491_external
      OK491_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00031450
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00006527
      WBGene00000419
    Transcript: C02F4.2c.2 VEP_consequence: 3_prime_UTR_variant
        VEP_impact: MODIFIER
        cDNA_position: 1974-?
        Exon_number: 14/14
      C02F4.2c.1 VEP_consequence: 3_prime_UTR_variant
        VEP_impact: MODIFIER
        cDNA_position: 2158-?
        Exon_number: 15/15
      C02F4.1.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,3_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        cDNA_position: 4897-?
        CDS_position: 4882-?
        Protein_position: 1628-?
        Intron_number: 19/20
        Exon_number: 19-21/21
      C02F4.2a.1 VEP_consequence: 3_prime_UTR_variant
        VEP_impact: MODIFIER
        cDNA_position: 2136-?
        Exon_number: 15/15
      C02F4.2a.2 VEP_consequence: 3_prime_UTR_variant
        VEP_impact: MODIFIER
        cDNA_position: 1952-?
        Exon_number: 14/14
  Isolation: Mutagen: UV/TMP
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele