WormBase Tree Display for Variation: WBVar00091848

WBVar00091848 Name: Public_name: ok562
    Other_name: C31C9.1c.1:c.1138_1349-103del
      C31C9.1b.1:c.1138_1334del
      C31C9.1d.1:c.1138_1295-103del
      CE32598:p.Ala380ValfsTer13
      C31C9.1a.2:c.1138_1388del
      CE32597:p.Ala380ValfsTer13
      C31C9.1a.1:c.1138_1388del
    HGVSg: CHROMOSOME_II:g.13635606_13636790del
  Sequence_details: SMap: S_parent: Sequence: C31C9
    Flanking_sequences: acattcggacagaatcaattcaactcgttc gttctcacttcttctaattgcatgcctcta
    Mapping_target: C31C9
    Type_of_mutation: Deletion
    PCR_product: OK562_external
      OK562_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00031493
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00006404
    Transcript: C31C9.1a.1 (11)
      C31C9.1b.1 (11)
      C31C9.1a.2 (11)
      C31C9.1c.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: C31C9.1c.1:c.1138_1349-103del
        cDNA_position: 1216-?
        CDS_position: 1138-?
        Protein_position: 380-?
        Intron_number: 5-6/7
        Exon_number: 5-6/8
      C31C9.1d.1 VEP_consequence: splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: C31C9.1d.1:c.1138_1295-103del
        cDNA_position: 1157-?
        CDS_position: 1138-?
        Protein_position: 380-?
        Intron_number: 5/6
        Exon_number: 5/7
  Isolation: Mutagen: UV/TMP
  Remark: Last updated on 29 Nov 2002
    Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele