WormBase Tree Display for Variation: WBVar00091873
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WBVar00091873 | Name | Public_name | ok587 | ||
---|---|---|---|---|---|
HGVSg | |||||
Sequence_details | SMap | S_parent | Sequence | Y51H4A | |
Flanking_sequences | ATACAAGATTTACTTTTTTGAAAAATCCTT | AGGAAATGTGAGTTTTTTTTAATGAAAAAT | |||
Mapping_target | Y51H4A | ||||
Type_of_mutation | Insertion | ggaaatgtgagtttaatatccn | |||
Deletion | |||||
PCR_product | OK587_external | ||||
OK587_internal | |||||
SeqStatus | Sequenced | ||||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00031509 | ||||
Laboratory | RB | ||||
Person | WBPerson46 | ||||
KO_consortium_allele | |||||
Status | Live | ||||
Affects | Gene | WBGene00168392 | |||
WBGene00013111 | |||||
WBGene00050612 | |||||
WBGene00168870 | |||||
WBGene00167233 | |||||
WBGene00305791 | |||||
WBGene00165557 | |||||
Transcript | Y51H4A.17c.1 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant | ||
VEP_impact | HIGH | ||||
cDNA_position | ?-777 | ||||
CDS_position | ?-775 | ||||
Protein_position | ?-259 | ||||
Intron_number | 2-3/9 | ||||
Exon_number | 3-4/10 | ||||
Y51H4A.943 | |||||
Y51H4A.382 | |||||
Y51H4A.584 | |||||
Y51H4A.611 | |||||
Y51H4A.430 | |||||
Y51H4A.17b.1 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant | |||
VEP_impact | HIGH | ||||
cDNA_position | ?-775 | ||||
CDS_position | ?-775 | ||||
Protein_position | ?-259 | ||||
Intron_number | 1-2/4 | ||||
Exon_number | 2-3/5 | ||||
Y51H4A.524 | |||||
Y51H4A.17a.1 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant | |||
VEP_impact | HIGH | ||||
cDNA_position | ?-777 | ||||
CDS_position | ?-775 | ||||
Protein_position | ?-259 | ||||
Intron_number | 2-3/9 | ||||
Exon_number | 3-4/10 | ||||
Isolation | Mutagen | UV/TMP | |||
Reference | WBPaper00065833 | ||||
Remark | Last updated on 29 Nov 2002 | ||||
Sequenced by the C. elegans Gene Knockout Consortium | Paper_evidence | WBPaper00041807 | |||
Method | KO_consortium_allele |