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WormBase Tree Display for Variation: WBVar00091873

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Name Class

WBVar00091873NamePublic_nameok587
HGVSg
Sequence_detailsSMapS_parentSequenceY51H4A
Flanking_sequencesATACAAGATTTACTTTTTTGAAAAATCCTTAGGAAATGTGAGTTTTTTTTAATGAAAAAT
Mapping_targetY51H4A
Type_of_mutationInsertionggaaatgtgagtttaatatccn
Deletion
PCR_productOK587_external
OK587_internal
SeqStatusSequenced
Variation_typeAllele
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00031509
LaboratoryRB
PersonWBPerson46
KO_consortium_allele
StatusLive
AffectsGeneWBGene00168392
WBGene00013111
WBGene00050612
WBGene00168870
WBGene00167233
WBGene00305791
WBGene00165557
TranscriptY51H4A.17c.1VEP_consequencesplice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
VEP_impactHIGH
cDNA_position?-777
CDS_position?-775
Protein_position?-259
Intron_number2-3/9
Exon_number3-4/10
Y51H4A.943
Y51H4A.382
Y51H4A.584
Y51H4A.611
Y51H4A.430
Y51H4A.17b.1VEP_consequencesplice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
VEP_impactHIGH
cDNA_position?-775
CDS_position?-775
Protein_position?-259
Intron_number1-2/4
Exon_number2-3/5
Y51H4A.524
Y51H4A.17a.1VEP_consequencesplice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
VEP_impactHIGH
cDNA_position?-777
CDS_position?-775
Protein_position?-259
Intron_number2-3/9
Exon_number3-4/10
IsolationMutagenUV/TMP
ReferenceWBPaper00065833
RemarkLast updated on 29 Nov 2002
Sequenced by the C. elegans Gene Knockout ConsortiumPaper_evidenceWBPaper00041807
MethodKO_consortium_allele