WormBase Tree Display for Variation: WBVar00091880

WBVar00091880 Evidence: Paper_evidence: WBPaper00032196
  Name: Public_name: ok594
    Other_name: C25G6.5.1:c.111+5_610-90del
    HGVSg: CHROMOSOME_X:g.1254473_1255500del
  Sequence_details: SMap: S_parent: Sequence: C25G6
    Flanking_sequences: tacatactggttaatataataccagttaac caacctcttttggtgaatactcagtcccat
    Mapping_target: C25G6
    Type_of_mutation: Deletion
    PCR_product: OK594_external
      OK594_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00031512
      WBStrain00049102
      WBStrain00049488
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00016110
    Transcript: C25G6.5.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: C25G6.5.1:c.111+5_610-90del
        Intron_number: 2-5/9
        Exon_number: 3-5/10
  Isolation: Mutagen: UV/TMP
  Description: Phenotype (16)
    Phenotype_not_observed: WBPhenotype:0001012 Paper_evidence: WBPaper00032196
        Curator_confirmed: WBPerson712
        Remark: Animals were as susceptible to infection by P. aeruginosa as N2 animals. Paper_evidence: WBPaper00032196
            Curator_confirmed: WBPerson712
        Phenotype_assay: Strain: WBStrain00031512 Paper_evidence: WBPaper00032196
              Curator_confirmed: WBPerson712
  Reference: WBPaper00043908
    WBPaper00032196
    WBPaper00064746
  Remark: Last updated on 29 Nov 2002
    Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele