WormBase Tree Display for Variation: WBVar00091903

WBVar00091903 Name: Public_name: ok619
    HGVSg: CHROMOSOME_III:g.9782936_9783877del
  Sequence_details: SMap: S_parent: Sequence: R10E11
    Flanking_sequences: CCCTTTCCAATCATCAGCACTTGACCGATACAGTCAACGCATCTCAGTTG AACAACATTTTAAAACCCGATGAAAATTGTGCAAAAACAAAAGTTTGAAA
    Mapping_target: R10E11
    Type_of_mutation: Deletion
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00031520
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live: Curator_confirmed: WBPerson4025
  Affects: Gene: WBGene00006911
      WBGene00011218
    Transcript: R10E11.2.1 VEP_consequence: 3_prime_UTR_variant
        VEP_impact: MODIFIER
        cDNA_position: 676-?
        Exon_number: 5/5
      R10E11.6a.1 VEP_consequence: splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        Intron_number: 2/6
        Exon_number: 1-2/7
      R10E11.6b.1 VEP_consequence: splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        Intron_number: 1/3
        Exon_number: 1/4
      R10E11.6a.2 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        Intron_number: 1-3/7
        Exon_number: 1-3/8
  Isolation: Mutagen: UV/TMP
  Genetics: Mapping_data: In_multi_point: 5015
  Remark: This was suppressed because it overlapped with a corrected genome sequence error feature Feature_evidence: WBsf268022
    This was un-suppressed after examination showed it is not changed by the corrected genome sequence error Curator_confirmed: WBPerson4025
    Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele