WormBase Tree Display for Variation: WBVar00091912

WBVar00091912 Name: Public_name: ok628
    Other_name: F18F11.3h.1:c.769_1125+500del
      F18F11.3f.1:c.769_1125+500del
      F18F11.3b.1:c.769_1125+500del
      F18F11.3a.1:c.769_1125+500del
      F18F11.3g.1:c.769_1125+500del
      F18F11.3d.1:c.769_1125+500del
      F18F11.3c.1:c.769_1125+500del
      F18F11.3e.1:c.769_1125+500del
    HGVSg: CHROMOSOME_IV:g.346895_347802del
  Sequence_details: SMap: S_parent: Sequence: F18F11
    Flanking_sequences: attttcaaatctaccaagcctggagatata cgtctaaaaagagtagaaggggagtggttg
    Mapping_target: F18F11
    Type_of_mutation: Deletion
    PCR_product: ok628_external
      ok628_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00031528
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00017576
    Transcript: F18F11.3e.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F18F11.3e.1:c.769_1125+500del
        cDNA_position: 769-?
        CDS_position: 769-?
        Protein_position: 257-?
        Intron_number: 8-9/25
        Exon_number: 8-9/26
      F18F11.3g.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F18F11.3g.1:c.769_1125+500del
        cDNA_position: 769-?
        CDS_position: 769-?
        Protein_position: 257-?
        Intron_number: 8-9/25
        Exon_number: 8-9/26
      F18F11.3f.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F18F11.3f.1:c.769_1125+500del
        cDNA_position: 769-?
        CDS_position: 769-?
        Protein_position: 257-?
        Intron_number: 8-9/24
        Exon_number: 8-9/25
      F18F11.3h.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F18F11.3h.1:c.769_1125+500del
        cDNA_position: 769-?
        CDS_position: 769-?
        Protein_position: 257-?
        Intron_number: 8-9/26
        Exon_number: 8-9/27
      F18F11.3d.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F18F11.3d.1:c.769_1125+500del
        cDNA_position: 769-?
        CDS_position: 769-?
        Protein_position: 257-?
        Intron_number: 8-9/25
        Exon_number: 8-9/26
      F18F11.3a.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F18F11.3a.1:c.769_1125+500del
        cDNA_position: 769-?
        CDS_position: 769-?
        Protein_position: 257-?
        Intron_number: 8-9/25
        Exon_number: 8-9/26
      F18F11.3b.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F18F11.3b.1:c.769_1125+500del
        cDNA_position: 769-?
        CDS_position: 769-?
        Protein_position: 257-?
        Intron_number: 8-9/23
        Exon_number: 8-9/24
      F18F11.3c.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F18F11.3c.1:c.769_1125+500del
        cDNA_position: 769-?
        CDS_position: 769-?
        Protein_position: 257-?
        Intron_number: 8-9/24
        Exon_number: 8-9/25
  Isolation: Mutagen: UV/TMP
  Genetics: Mapping_data: In_multi_point: 5537
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele