WormBase Tree Display for Variation: WBVar00091926

WBVar00091926 Evidence: Paper_evidence: WBPaper00006146
  Name: Public_name: ok642
    Other_name: C37E2.5d.1:c.145+224_300+45del
      C37E2.5a.1:c.103+224_258+45del
    HGVSg: CHROMOSOME_X:g.14198626_14199403del
  Sequence_details: SMap: S_parent: Sequence: C37E2
    Flanking_sequences: tccgatttcatctaacataatttcctagac tgtaaatttatattatacgaaaatatttct
    Mapping_target: C37E2
    Type_of_mutation: Deletion
    PCR_product: ok642_external
      ok642_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00024201
      WBStrain00031536
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00000458
      WBGene00173168
    Transcript: C37E2.5d.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: C37E2.5d.1:c.145+224_300+45del
        Intron_number: 3-4/7
        Exon_number: 4/8
      C37E2.6
      C37E2.5b.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        Intron_number: 2-3/6
        Exon_number: 1-3/7
      C37E2.5c.1 VEP_consequence: splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        Intron_number: 1/4
        Exon_number: 1/5
      C37E2.5a.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: C37E2.5a.1:c.103+224_258+45del
        Intron_number: 2-3/6
        Exon_number: 3/7
    Interactor: WBInteraction000520816
  Isolation: Mutagen: UV/TMP
  Reference: WBPaper00006146
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele