WormBase Tree Display for Variation: WBVar00091949

WBVar00091949 Name: Public_name: ok665
    Other_name: T13H5.2a.1:c.473+80_1145del
      T13H5.2b.1:c.437+80_1109del
    HGVSg: CHROMOSOME_II:g.8515715_8516629del
  Sequence_details: SMap: S_parent: Sequence: T13H5
    Flanking_sequences: ttggaatactgtttactctgtgacttatat atataaattcgtatttgataatactcatag
    Mapping_target: T13H5
    Type_of_mutation: Deletion
    PCR_product: ok665_external
      ok665_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00031551
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00011756
    Transcript: T13H5.2a.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: T13H5.2a.1:c.473+80_1145del
        cDNA_position: ?-1145
        CDS_position: ?-1145
        Protein_position: ?-382
        Intron_number: 2-4/5
        Exon_number: 3-5/6
      T13H5.2b.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: T13H5.2b.1:c.437+80_1109del
        cDNA_position: ?-1109
        CDS_position: ?-1109
        Protein_position: ?-370
        Intron_number: 2-4/4
        Exon_number: 3-5/5
  Isolation: Mutagen: UV/TMP
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele