WormBase Tree Display for Variation: WBVar00091963

WBVar00091963 Name: Public_name: ok679
    HGVSg: CHROMOSOME_V:g.10771074_10772770delinsCCGG
  Sequence_details: SMap: S_parent: Sequence: D1054
    Flanking_sequences: gcgcttcagcgaggccctcgagctcgatga agtgatgattaaattcttattttgttatat
    Mapping_target: D1054
    Type_of_mutation: Insertion: CCGG
      Deletion
    PCR_product: ok679_external
      ok679_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00035843
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00003923
      WBGene00023430
      WBGene00008371
    Transcript: D1054.3a.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        cDNA_position: ?-604
        CDS_position: ?-592
        Protein_position: ?-198
        Intron_number: 2-4/5
        Exon_number: 1-5/6
      D1054.3b.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        cDNA_position: ?-166
        CDS_position: ?-166
        Protein_position: ?-56
        Intron_number: 1/1
        Exon_number: 1-2/2
      D1054.2.1 VEP_consequence: coding_sequence_variant,3_prime_UTR_variant
        VEP_impact: MODIFIER
        cDNA_position: 565-?
        CDS_position: 552-?
        Protein_position: 184-?
        Exon_number: 5-6/6
      D1054.17 VEP_consequence: transcript_ablation
        VEP_impact: HIGH
        Exon_number: 1/1
  Isolation: Mutagen: UV/TMP
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele