WormBase Tree Display for Variation: WBVar00091988
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| WBVar00091988 | Evidence | Paper_evidence | WBPaper00028448 | ||||
|---|---|---|---|---|---|---|---|
| Name | Public_name | ok704 | |||||
| Other_name | C33H5.4:n.472_2236delinsCACAAACACAAACAGCAAACA | ||||||
| HGVSg | CHROMOSOME_IV:g.7797709_7799666delinsCACAAACACAAACAGCAAACA | ||||||
| Sequence_details | SMap | S_parent | Sequence | C33H5 | |||
| Flanking_sequences | ctcaatgcgaagaacaaagttcaactcaga | caaacacagctcaaagatcatcaaacggat | |||||
| Mapping_target | C33H5 | ||||||
| Type_of_mutation | Insertion | CACAAACACAAACAGCAAACA | |||||
| Deletion | |||||||
| PCR_product | ok704_external | ||||||
| ok704_internal | |||||||
| SeqStatus | Sequenced | ||||||
| Variation_type | Allele | ||||||
| Origin | Species | Caenorhabditis elegans | |||||
| Strain | WBStrain00031579 | ||||||
| Laboratory | RB | ||||||
| Person | WBPerson46 | ||||||
| KO_consortium_allele | |||||||
| Status | Live | ||||||
| Affects | Gene | WBGene00002221 | |||||
| Pseudogene | C33H5.4 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,non_coding_transcript_exon_variant,intron_variant | ||||
| VEP_impact | HIGH | ||||||
| HGVSc | C33H5.4:n.472_2236delinsCACAAACACAAACAGCAAACA | ||||||
| cDNA_position | 472-2236 | ||||||
| Intron_number | 3-7/9 | ||||||
| Exon_number | 2-8/10 | ||||||
| Isolation | Mutagen | UV/TMP | |||||
| Genetics | Mapping_data | In_multi_point | 4464 | ||||
| Description | Phenotype_not_observed | WBPhenotype:0000679 | Paper_evidence | WBPaper00028448 | |||
| Curator_confirmed | WBPerson712 | ||||||
| Remark | PKD-2::GFP localization is not different from wild type. | Paper_evidence | WBPaper00028448 | ||||
| Curator_confirmed | WBPerson712 | ||||||
| WBPhenotype:0001175 | Paper_evidence | WBPaper00048917 | |||||
| Curator_confirmed | WBPerson721 | ||||||
| Reference | WBPaper00028448 | ||||||
| WBPaper00048917 | |||||||
| Remark | Sequenced by the C. elegans Gene Knockout Consortium | Paper_evidence | WBPaper00041807 | ||||
| Method | KO_consortium_allele |
