WormBase Tree Display for Variation: WBVar00092035

WBVar00092035 Evidence: Paper_evidence: WBPaper00032196
  Name: Public_name: ok755
    Other_name: C15B12.5e.1:c.823-122_1368+454delinsATTCA
      C15B12.5d.1:c.916-122_1461+454delinsATTCA
      C15B12.5b.1:c.916-122_1461+454delinsATTCA
      C15B12.5a.1:c.823-122_1368+454delinsATTCA
      C15B12.5c.1:c.823-122_1368+454delinsATTCA
    HGVSg: CHROMOSOME_X:g.6481298_6482561delinsTGAAT
  Sequence_details: SMap: S_parent: Sequence: C15B12
    Flanking_sequences: tcacttgtcctttgtctattcaaaaattgt acagcagtattcaactgaaaaacaattgtt
    Mapping_target: C15B12
    Type_of_mutation: Insertion: TGAAT
      Deletion
    PCR_product: ok755_external
      ok755_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00031608
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00001517
    Transcript: C15B12.5b.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: C15B12.5b.1:c.916-122_1461+454delinsATTCA
        Intron_number: 10-14/19
        Exon_number: 11-14/20
      C15B12.5d.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: C15B12.5d.1:c.916-122_1461+454delinsATTCA
        Intron_number: 9-13/17
        Exon_number: 10-13/18
      C15B12.5c.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: C15B12.5c.1:c.823-122_1368+454delinsATTCA
        Intron_number: 8-12/16
        Exon_number: 9-12/17
      C15B12.5a.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: C15B12.5a.1:c.823-122_1368+454delinsATTCA
        Intron_number: 8-12/17
        Exon_number: 9-12/18
      C15B12.5e.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: C15B12.5e.1:c.823-122_1368+454delinsATTCA
        Intron_number: 8-12/16
        Exon_number: 9-12/17
  Isolation: Mutagen: UV/TMP
  Description: Phenotype_not_observed: WBPhenotype:0001012 Paper_evidence: WBPaper00032196
        Curator_confirmed: WBPerson712
        Remark: Animals were as susceptible to infection by P. aeruginosa as N2 animals. Paper_evidence: WBPaper00032196
            Curator_confirmed: WBPerson712
        Phenotype_assay: Strain: WBStrain00031608 Paper_evidence: WBPaper00032196
              Curator_confirmed: WBPerson712
  Reference: WBPaper00032196
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele