WormBase Tree Display for Variation: WBVar00092145

WBVar00092145 Name: Public_name: ok870
    HGVSg: CHROMOSOME_III:g.7572993_7574246del
  Sequence_details: SMap: S_parent: Sequence: R13A5
    Flanking_sequences: cacttttgaaatggagattagtgaacaacg gtgtacagtttggcgaaaccattggctaag
    Mapping_target: R13A5
    Type_of_mutation: Deletion
    PCR_product: ok870_external
      ok870_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00035922
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00202194
      WBGene00003063
    Transcript: R13A5.16 VEP_consequence: transcript_ablation
        VEP_impact: HIGH
        Exon_number: 1/1
      R13A5.12.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        cDNA_position: ?-805
        CDS_position: ?-801
        Protein_position: ?-267
        Intron_number: 2-3/5
        Exon_number: 1-4/6
  Isolation: Mutagen: UV/TMP
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele