WormBase Tree Display for Variation: WBVar00092155

WBVar00092155 Name: Public_name: ok880
    Other_name: CE39724:p.His598GlnfsTer15
      F13E6.6.1:c.1794_2412del
    HGVSg: CHROMOSOME_X:g.10700374_10701544del
  Sequence_details: SMap: S_parent: Sequence: F13E6
    Flanking_sequences: acaaaaacttaccttttcaacttctgctct tgcgatctggataccaagccacgatccatg
    Mapping_target: F13E6
    Type_of_mutation: Deletion
    PCR_product: ok880_external
      ok880_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00031686
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00006468
    Transcript: F13E6.6.1 (11)
    Interactor: WBInteraction000052320
      WBInteraction000534902
      WBInteraction000534903
      WBInteraction000534904
  Isolation: Mutagen: UV/TMP
  Description: Phenotype: WBPhenotype:0000633 Paper_evidence: WBPaper00045955
        Curator_confirmed: WBPerson557
        Remark: Branch defects scored in PLM neuron. Paper_evidence: WBPaper00045955
            Curator_confirmed: WBPerson557
        Penetrance: Low: Paper_evidence: WBPaper00045955
              Curator_confirmed: WBPerson557
      WBPhenotype:0001911 Paper_evidence: WBPaper00049131
        Curator_confirmed: WBPerson712
        Remark: We found that the rhgf-1(ok880) and rhgf-1(gk217) mutants were defective in axon regeneration (Fig. 3d and Supplementary Table 2). Paper_evidence: WBPaper00049131
            Curator_confirmed: WBPerson712
    Phenotype_not_observed (9)
  Reference: WBPaper00038487
    WBPaper00040813
    WBPaper00028856
    WBPaper00045955
    WBPaper00049131
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele