WormBase Tree Display for Variation: WBVar00092166

WBVar00092166 Name: Public_name: ok892
    Other_name: K08F8.3.2:c.-15-167_545delinsTTCTTT
    HGVSg: CHROMOSOME_II:g.8757652_8758798delinsAAAGAA
  Sequence_details: SMap: S_parent: Sequence: K08F8
    Flanking_sequences: taatcaggccttggaatttgaattccagaa taaagaatgaaaacaagtttcagactggta
    Mapping_target: K08F8
    Type_of_mutation: Insertion: AAAGAA
      Deletion
    PCR_product: ok892_external
      ok892_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00035894
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00001505
    Transcript: K08F8.3.2 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: K08F8.3.2:c.-15-167_545delinsTTCTTT
        cDNA_position: ?-621
        CDS_position: ?-545
        Protein_position: ?-182
        Intron_number: 1-6/12
        Exon_number: 2-7/13
      K08F8.3.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        cDNA_position: ?-560
        CDS_position: ?-545
        Protein_position: ?-182
        Intron_number: 2-5/11
        Exon_number: 1-6/12
  Isolation: Mutagen: UV/TMP
  Description: Phenotype: WBPhenotype:0002035 Paper_evidence: WBPaper00041118
        Curator_confirmed: WBPerson9999
        Remark: partial resistance to Coprinopsis cinerea fruiting body lectin CCL2 Paper_evidence: WBPaper00041118
            Curator_confirmed: WBPerson9999
        Affected_by: Molecule: WBMol:00007869 Paper_evidence: WBPaper00041118
              Curator_confirmed: WBPerson9999
  Reference: WBPaper00041118
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele