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WormBase Tree Display for Variation: WBVar00092177

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Name Class

WBVar00092177NamePublic_nameok904
Other_nameCE19271:p.Ala713TrpfsTer57
Y76A2A.2b.1:c.2136_2557delinsTTGGAAA
CE26305:p.Ala835TrpfsTer57
Y76A2A.2a.1:c.2502_2923delinsTTGGAAA
HGVSgCHROMOSOME_III:g.13441327_13442936delinsTTTCCAA
Sequence_detailsSMapS_parentSequenceCHROMOSOME_III
Flanking_sequencescacgtagagtatagattgcaagtgatgcttaccgcatttccaatcggatgctccgacaaa
Mapping_targetCHROMOSOME_III
Type_of_mutationInsertionTTTCCAA
Deletion
PCR_productok904_external
ok904_internal
SeqStatusSequenced
Variation_typeAllele
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00003820
WBStrain00035967
LaboratoryRB
PersonWBPerson46
KO_consortium_allele
StatusLive
AffectsGeneWBGene00000834
TranscriptY76A2A.2b.1 (11)
Y76A2A.2a.1 (11)
IsolationMutagenUV/TMP
DescriptionPhenotypeWBPhenotype:0000050Paper_evidenceWBPaper00050460
Curator_confirmedWBPerson712
RemarkThe strain VC672 contains a deletion in cua-1(ok904), spanning exons 13 through 15 (Fig. 2A; Supplemental Fig. S2C), which is genetically balanced due to the embryonic lethality of cua-1 mutant worms. Pcua-1::CUA-1.1::GFP, indicating that the CUA-1.1::GFP translational fusion protein is functional (Fig. 3C).Paper_evidenceWBPaper00050460
Curator_confirmedWBPerson712
Rescued_by_transgeneWBTransgene00023826
WBTransgene00023827
Affected_byMoleculeWBMol:00002485Paper_evidenceWBPaper00050460
Curator_confirmedWBPerson712
WBMol:00004203Paper_evidenceWBPaper00050460
Curator_confirmedWBPerson712
EQ_annotationsLife_stageWBls:0000108PATO:0000297Paper_evidenceWBPaper00050460
Curator_confirmedWBPerson712
GO_termGO:0055070PATO:0000460Paper_evidenceWBPaper00050460
Curator_confirmedWBPerson712
Molecule_affectedWBMol:00007840PATO:0000460Paper_evidenceWBPaper00050460
Curator_confirmedWBPerson712
Phenotype_assayStrainWBStrain00035967Paper_evidenceWBPaper00050460
Curator_confirmedWBPerson712
Disease_infoModels_diseaseDOID:1838
Models_disease_in_annotationWBDOannot00000385
ReferenceWBPaper00050460
RemarkSequenced by the C. elegans Gene Knockout ConsortiumPaper_evidenceWBPaper00041807
MethodKO_consortium_allele