WormBase Tree Display for Variation: WBVar00092226

WBVar00092226 Name: Public_name: ok955
    Other_name: E03G2.2.1:c.1853_2160+274del
    HGVSg: CHROMOSOME_X:g.15934519_15935176del
  Sequence_details: SMap: S_parent: Sequence: E03G2
    Flanking_sequences: gaacaacttactaagccagctcttcggaat caatagctgcagtgtcaacttccttctcac
    Mapping_target: E03G2
    Type_of_mutation: Deletion
    PCR_product: ok955_external
      ok955_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00031736
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00003409
    Transcript: E03G2.2.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: E03G2.2.1:c.1853_2160+274del
        cDNA_position: 1855-?
        CDS_position: 1853-?
        Protein_position: 618-?
        Intron_number: 11-12/24
        Exon_number: 11-12/25
  Isolation: Mutagen: UV/TMP
  Description: Phenotype_not_observed: WBPhenotype:0001208 Paper_evidence: WBPaper00027644
        Curator_confirmed: WBPerson557
        Remark: Animals were not resistant to RNAi as assayed on either pop-1 RNAi or unc-22 RNAi. Paper_evidence: WBPaper00027644
            Curator_confirmed: WBPerson557
        Phenotype_assay: Treatment: Animals reared on both pop-1 and unc-22 feeding plates at 15, 20, 25, and 26C. Paper_evidence: WBPaper00027644
              Curator_confirmed: WBPerson557
  Reference: WBPaper00027644
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele