WormBase Tree Display for Variation: WBVar00092240
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WBVar00092240 | Name | Public_name | ok969 | ||
---|---|---|---|---|---|
Other_name | F31D5.3a.1:c.1344-7837_1344-6656del | ||||
CE53944:p.Cys1042_Gly1319delinsTer | |||||
F31D5.3b.1:c.1344-7837_1344-6656del | |||||
F31D5.5.1:c.3125_3955del | |||||
HGVSg | CHROMOSOME_II:g.4196994_4198175del | ||||
Sequence_details | SMap | S_parent | Sequence | F31D5 | |
Flanking_sequences | tattcccagtatctcttttgtaccttgctc | agtcgtgatattctgatagaccatcttcgc | |||
Mapping_target | F31D5 | ||||
Type_of_mutation | Deletion | ||||
PCR_product | ok969_external | ||||
ok969_internal | |||||
SeqStatus | Sequenced | ||||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00035946 | ||||
Laboratory | RB | ||||
Person | WBPerson46 | ||||
KO_consortium_allele | |||||
Status | Live | ||||
Affects | Gene | WBGene00017948 | |||
WBGene00006495 | |||||
Transcript | F31D5.3b.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F31D5.3b.1:c.1344-7837_1344-6656del | ||||
Intron_number | 5/12 | ||||
F31D5.5.1 (11) | |||||
F31D5.3a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F31D5.3a.1:c.1344-7837_1344-6656del | ||||
Intron_number | 6/12 | ||||
Isolation | Mutagen | UV/TMP | |||
Remark | Sequenced by the C. elegans Gene Knockout Consortium | Paper_evidence | WBPaper00041807 | ||
Method | KO_consortium_allele |