WormBase Tree Display for Variation: WBVar00092258

WBVar00092258 Name: Public_name: ok987
    Other_name: F16H9.2b.1:c.35-46863_35-44608del
      F16H9.2a.1:c.-23-46863_-23-44608del
      F22E10.4:n.1485_3557-20del
    HGVSg: CHROMOSOME_X:g.12751911_12754166del
  Sequence_details: SMap: S_parent: Sequence: F22E10
    Flanking_sequences: tccattggcacctgaaatttgttgtgtatt tcaatgtttagctctcgaacatcagttccg
    Mapping_target: F22E10
    Type_of_mutation: Deletion
    PCR_product: ok987_external
      ok987_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00031748
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00008901
      WBGene00197878
      WBGene00196626
      WBGene00004009
    Transcript: F22E10.8 VEP_consequence: transcript_ablation
        VEP_impact: HIGH
        Exon_number: 1/1
      F16H9.2b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F16H9.2b.1:c.35-46863_35-44608del
        Intron_number: 1/3
      F22E10.9 VEP_consequence: transcript_ablation
        VEP_impact: HIGH
        Exon_number: 1/1
      F16H9.2a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F16H9.2a.1:c.-23-46863_-23-44608del
        Intron_number: 1/4
    Pseudogene: F22E10.4 VEP_consequence: splice_acceptor_variant,splice_donor_variant,non_coding_transcript_exon_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F22E10.4:n.1485_3557-20del
        cDNA_position: 1485-?
        Intron_number: 6-9/10
        Exon_number: 6-9/11
  Isolation: Mutagen: UV/TMP
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele